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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank125Aligned Residues246
% Identity39%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380.........390. ........400..... ....410....
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Query Sequence  IQPSELTFVQEIGSGQFGLVHLGYWLNKD. . . . KVAIKTIQEGAMSE. . . . EDFIEEAEV
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
Template Known Secondary structure 

GGG



B

TTS
TTS


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S
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   121........130.........140.........150.........160.........170.........180
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEG
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Template Sequence  MHSLDHRNLIRLYGVVL. TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG
Template Known Secondary structure  T


TTB


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BSTT
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   181........190....... ..200.........210.........220.........230.........
 
   475....480.........490.........500.........510.........520.........530....
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Query Sequence  MAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV
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Template Sequence  MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCAPES
Template Known Secondary structure  TT


S

SGGGSSSS


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   240.........250.........260.........270.... .....280........
 
   535....540.........550.........560.........570......... 580.........590...
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Query Sequence  FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG. FRLYKPRLASCHVY
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Template Sequence  LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
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TTT

TTTT

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   302.......310.........320.........330.........340.........350.........360.
 
   594.....600.........610.........620
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Query Sequence  QIMNHCWKEKPEDRPPFSQLLSQLAEI
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Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEA
Template Known Secondary structure  T
SSGGGS

T
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   362.......370.........380........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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