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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank238Aligned Residues249
% Identity24%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380........ .390......... 400.........410......
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Query Sequence  VIQPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQ. . . . EGAMSEEDFIEEAEVMM
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ
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TT
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   17..20.........30.........40.........50.........60.........70......
 
   417..420.........430.........440.........450.........460.........470......
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Query Sequence  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMA
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Template Sequence  GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL. QQNVHFKEETVKLFICELVMALD
Template Known Secondary structure  T


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   77..80.........90.........100.........110.. .......120.........130.....
 
   477..480.........490.........500.........510.........520.........530......
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Query Sequence  YLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS
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Template Sequence  YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGT. . KPYMAPEMFS
Template Known Secondary structure  TT



SGGG
TTS



TT


TT

B



S
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   136...140.........150.........160.........170.........180... ......190...
 
   537 ..540.........550.........560.........570........ .580.........590.
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Query Sequence  F. . . SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST. . GFRLYKPRLASCH
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Template Sequence  SRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQE
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SS

B
T.SS
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   194.....200.........210........ .220.........230.........240.........250..
 
   592.......600......... 610....
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Query Sequence  VYQIMNHCWKEKPEDRPP. FSQLL
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Template Sequence  MVSLLKKLLEPNPDQRFSQLSDVQ
Template Known Secondary structure  S
SSTTTS

S
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   253......260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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