Job Description Q03526 Confidence 100.00% Date Wed Jul 10 14:09:50 BST 2013 Rank 277 Aligned Residues 255 % Identity 19% Template c4fi1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: crystal structure of scck2 alpha in complex with atp Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		K	W	V	I	Q	P	S	E	L	T	F	V	Q	E	I	G	S	G	Q	F	G	L	V	H	L	G	Y	W	L	.	N	K	D	K	V	A	I	K	T	I	Q	E	G	A	M	S	E	E	D	F	I	E	E	A	E	V	M	M	K	L
Query Conservation																															.
Alig confidence																															.												.	.
Template Conservation																																											.	.
Template Sequence		D	W	S	T	N	T	K	D	Y	E	I	E	N	K	V	G	R	G	K	Y	S	E	V	F	Q	G	V	K	L	D	S	K	V	K	I	V	I	K	M	L	K	.	.	P	V	K	K	K	K	I	K	R	E	I	K	I	L	T	D	L
Template Known Secondary structure				B	S		S	T	T											T	T									T	T	T	T										.	.	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																																									419	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	P	K	L	V	Q	L	Y	G	V	C	L	E	Q	.	.	A	P	I	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		S	N	E	K	V	P	P	T	T	L	P	F	Q	K	D	Q	Y	Y	T	N	Q	K	E	D	V	L	K	F	I	R	P	Y	I	F	D	Q	P	H	N	G	H	A	N	I	I	H	L	F	D	I	I	K	D	P	I	S	K	T	P	A
Template Known Secondary structure					S	S		G	G	G	S																	T	T			S					S				G	G	G	G	B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	S	Q	R	G	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	K	A	C	V	I	H	R	D	L	A	A	R	N	C	L	V	G	.
Query Conservation																																																													.
Alig confidence																	.	.	.	.																																									.
Template Conservation																	.	.	.	.
Template Sequence		L	V	F	E	Y	V	D	N	V	D	F	R	I	L	Y	.	.	.	.	P	K	L	T	D	L	E	I	R	F	Y	M	F	E	L	L	K	A	L	D	Y	C	H	S	M	G	I	M	H	R	D	V	K	P	H	N	V	M	I	D	H
Template Known Secondary structure																G	.	.	.	.	G	G																							T	T							S	G	G	G					G
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		E	N	Q	V	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	R	.	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E
Query Conservation																																													.
Alig confidence																															.	.													.
Template Conservation																															.	.
Template Sequence		K	N	K	K	L	R	L	I	D	W	G	L	A	E	F	Y	H	V	N	M	E	Y	N	V	R	V	A	S	R	.	.	F	F	K	G	P	E	L	L	V	D	Y	R	M	Y	D	Y	S	L	D	L	W	S	F	G	T	M	L	A	S
Template Known Secondary structure		G	G	T								T	T						T	T					S			S		G	.	.	G	G							T	T						T
Template Predicted Secondary structure																															.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.																																					.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	F	K	R	E	P	F	F	H	G	T	S	N	T	D	Q	L	V	K	I	V	K	V	L	G	T	S	D	F	E	K	Y	L	L	K	Y	E	I	T	L	P	R	E	F	Y	D	M	D	Q	Y	I	R	K	P	W	H	R	F	I
Template Known Secondary structure					T		S	S	S	S			S	S																								T	T					G	G	G	G	G									G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.			.	.	.	.	620	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		F	R	L	Y	K	P	R	L	A	S	C	H	V	Y	Q	I	M	N	H	C	W	K	E	K	P	E	D	R	P	P	F	S	Q	L	L	S	.	.	Q	L	A	E	I	A	E
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		N	D	G	N	K	H	L	S	G	N	D	E	I	I	D	L	I	D	N	L	L	R	Y	D	H	Q	E	R	L	T	A	K	E	A	M	G	H	P	W	F	A	P	I	R	E
Template Known Secondary structure			T	T	T						S											S		S	S	G	G	G	S								T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D