Job Description Q03526 Confidence 100.00% Date Wed Jul 10 14:09:50 BST 2013 Rank 49 Aligned Residues 288 % Identity 20% Template c4dn5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 14; PDBTitle: crystal structure of nf-kb-inducing kinase (nik) Resolution 2.50 Å

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		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	P	L	L	I	Q	Y	H	Q	Y	N	G	G	G	L	V	T	R	L	R	Y	P	V	C	S	W	R	Q	K	A	P	V	T	A	G	L	R	Y	G	K	W	V	I	Q	P	S	E	L	T	F	V	Q	E	I	G	S	G	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	T	S	L	A	K	T	W	A	A	R	G	S	R	S	R	E	P	S	P	K	T	E	D	N	E	G	V	L	L	T	E	K	L	K	P	V	D	Y	E	Y	R	E	E	V	H	W	A	T	H	Q	L	R	L	G	R	G	S	F
Template Known Secondary structure														T	T	S							S										S	T	T	S			B	T	T	B			B	T	T	T					S	S		S				S	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	L	V	H	L	G	Y	W	L	.	N	K	D	K	V	A	I	K	T	I	Q	E	G	A	M	S	E	E	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V	Q	L	Y	G	V	C	L	E	Q	A	P	I	C	L
Query Conservation											.
Alig confidence											.																		.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V	P	L	Y	G	A	V	R	E	G	P	W	V	N	I
Template Known Secondary structure										T	T	T											T	T	T			T	.	.	.	.					T	T	S	S				T	T	B										T	T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	S	Q	R	G	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	K	A	C	V	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	C	.	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D
Template Known Secondary structure							T	T		B									S	S	.																							T	T				S			S	G	G	G					T	T
Template Predicted Secondary structure																					.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		499	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		Q	V	.	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	R	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F
Query Conservation				.
Alig confidence				.																				.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	I	P	G	T	E	T	.	.	.	.	.	.	.	.	.	H	M	A	P	E	V	V	L	G	R	S	C	D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L
Template Known Secondary structure		S									T	T								S		G	G	.	.	.	.	.	.	.	.	.	G							T	T					T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.										.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580			.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	S	T	G	F	.	.	R	L	Y	K	P	R	L	A	S	C	H	V	Y	Q	I	M	N	H	C	W	K	E	K	P	E	D	R	P	P	F	S	Q	L	L	S
Query Conservation																									.	.
Alig confidence			.																						.	.
Template Conservation			.
Template Sequence		N	.	G	C	H	P	W	T	Q	F	F	R	G	P	L	C	L	K	I	A	S	E	P	P	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q	E	G	L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G
Template Known Secondary structure			.	S	S		T	T	T	T	T			S									S			G	G	G	G	S		T	T	S												S		S	S	T	T	S	S
Template Predicted Secondary structure			.
Template SS confidence
		591		.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
		616	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	E	I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	N	R	A	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D