Job Description Q03526 Confidence 100.00% Date Wed Jul 10 14:09:50 BST 2013 Rank 265 Aligned Residues 237 % Identity 25% Template c3zduA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain Resolution 2.20 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		S	E	L	T	F	V	Q	E	I	G	S	G	Q	F	G	L	V	H	L	G	Y	W	L	.	N	K	D	K	V	A	I	K	T	I	Q	E	G	A	M	S	E	E	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V
Query Conservation																									.
Alig confidence																									.													.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		E	M	Y	E	T	L	G	K	V	G	E	G	S	Y	G	T	V	M	K	C	K	H	K	N	T	G	Q	I	V	A	I	K	I	F	Y	N	.	.	.	.	.	K	I	A	M	R	E	I	K	F	L	K	Q	F	H	H	E	N	L	V
Template Known Secondary structure														T	T									T	T	T												.	.	.	.	.																T	T	B
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y	G	V	C	L	E	Q	A	P	I	C	L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	S	Q	R	G	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	K	A	C	V	I
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		N	L	I	E	V	F	R	Q	K	K	K	I	H	L	V	F	E	F	I	D	H	T	V	L	D	E	L	Q	H	Y	C	H	G	.	L	E	S	K	R	L	R	K	Y	L	F	Q	I	L	R	A	I	D	Y	L	H	S	N	N	I	I
Template Known Secondary structure										S	S	S									S										S	T	T	S	.																							T	T		B
Template Predicted Secondary structure																																			.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	V	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	R	.	Y	S	S	K
Query Conservation																																																									.
Alig confidence																																							.	.	.	.	.	.													.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	I	T	K	L	C	D	F	G	F	A	R	T	D	I	Y	D	D	E	V	A	T	R	.	.	.	.	.	.	W	Y	R	A	P	E	L	V	L	K	D	T	S	Y	G	K	P
Template Known Secondary structure						S	G	G	G					T	T									S	S		B												.	.	.	.	.	.	T	T							T	T		S				T
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	S	T	G	F	R	L	Y	K	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		V	D	I	W	A	L	G	C	M	I	I	E	M	A	T	.	G	N	P	Y	L	P	S	S	S	D	L	D	L	L	H	K	I	V	L	K	V	G	N	L	S	P	H	L	Q	N	I	F	S	K	S	P	I	F	A	G	V	V	L	P
Template Known Secondary structure																	.	S	S		S	S			S	S												T															G	G	G	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
															587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	S	C	H	V	Y	Q	I	M	N	H	C	W	K	E	K	P	E	D	R	P	P	F	S	Q	L	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	Q	H	P	K	N	A	R	K	K	Y	P	K	L	N	G	L	L	A	D	I	V	H	A	C	L	Q	I	D	P	A	D	R	I	S	S	S	D	L	L	H
Template Known Secondary structure							S	S					S	T	T	S														S	S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D