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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank205Aligned Residues235
% Identity23%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380........ .390.........400.........410.........420.
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Query Sequence  IQPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGAMSEEDFIEEAEVMMKLSHP
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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TTTTSSTTSST


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   16...20.........30.........40.........50.........60.........70.....
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKA
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR. FSEDEARFFFQQLISGVSYAHAM
Template Known Secondary structure  TB


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TT
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   76...80.........90.........100.........110. ........120.........130....
 
   482.......490........ .500.........510.........520.........530.........
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Query Sequence  CVIHRDLAARNCLVGEN. . QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR
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Template Sequence  QVAHRDLKLENTLLDGSPAPRLKIADFGYTP. . . . . . . . . . . . . . . . AYIAPEVLLKKEY
Template Known Secondary structure 
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GGG


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   135....140.........150.........160..... ....170........
 
   540.........550.........560.........570......... 580.........590....
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Query Sequence  YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG. . . . . FRLYKPRLASCHVYQ
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Template Sequence  DGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH
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   194.....200.........210.. .......220.........230.........240.........250..
 
   595....600.........610.....
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Query Sequence  IMNHCWKEKPEDRPPFSQLLS
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Template Sequence  LISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
SSGGGS

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   253......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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