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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank246Aligned Residues237
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380........ .390......... 400.........410........ .
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQ. . . . EGAMSEEDFIEEAEVMMKL. S
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   420.........430.........440.........450.........460.........470.........
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Query Sequence  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLE
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR. FDEARARFYAAEIISALMFLH
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   413......420.........430.........440.........450 .........460.........470.
 
   480.........490.........500.........510.........520.........530.........
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Query Sequence  KACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR
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Template Sequence  DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK. . . . . . . . . . EGICGTPDYIAPEILQEML
Template Known Secondary structure  TT
B




GGG
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GGG

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   472.......480.........490.........500.. .......510.........520.
 
   540.........550.........560.........570.........580.........590.........
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Query Sequence  YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQIMNHC
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Template Sequence  YGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILN. DEVVYPTWLHEDATGILKSF
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   531........540......... 550.........560........ .570.........580........
 
   600......... 610.....
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Query Sequence  WKEKPEDRPP. . . . . . FSQLLS
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Template Sequence  MTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT
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   589590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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