Return to main results Retrieve Phyre Job Id

Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank53Aligned Residues247
% Identity20%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400...... ...410.........420.
Predicted Secondary structure 












...



Query SS confidence 









































. . .














Query Sequence  PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIQEGAMSEE. . . DFIEEAEVMMKLSHP
Query Conservation           

 
 

 
  
       



          ... 
  
   
  
 
 
Alig confidence 






















.

















...














Template Conservation     
     

 
 
  
     .

   


 
               

 

  
 

Template Sequence  TEEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP
Template Known Secondary structure 

TT.TTS
S


BT
Template Predicted Secondary structure 




.








Template SS confidence 



























































   10.........20.........30.. .......40.........50.........60........
 
   422.......430.........440.........450.........460.........470.........480.
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKA
Query Conservation 


 
 
         

 
    


   
      
       
  


 

 


  
Alig confidence 


































.























Template Conservation 


             

 
   

 
        .   
     
  


  
  

  
Template Sequence  NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE. YYSEADASHCIQQILEAVLHCHQM
Template Known Secondary structure  TB


SS


B

B
S.


T
Template Predicted Secondary structure 















.



Template SS confidence 



























































   71........80.........90.........100..... ....110.........120.........
 
   482.......490.........500 .........510.........520.........530........
Predicted Secondary structure 











...



















Query SS confidence 


















. . .





































Query Sequence  CVIHRDLAARNCLVGENQV. . . IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS
Query Conservation   






  



     ...


 





                  
 


 
   
Alig confidence 


















...









.


























Template Conservation   







 



        


 


 
 .             
     


     
Template Sequence  GVVHRNLKPENLLLASKLKGAAVKLADFGLAI. EVEGEQQAWFGFAGTPGYLSPEVLRKD
Template Known Secondary structure  T
B



SSTTSBSSTT




SS
B.


TT

B


S
S
GGG

TT
Template Predicted Secondary structure 

























.




















Template SS confidence 



























































   130.........140.........150.........160. ........170.........180........
 
   539540.........550.........560.........570.........580. ........590.....
Predicted Secondary structure 
















...







Query SS confidence 










































. . .













Query Sequence  RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR. . . LYKPRLASCHVYQI
Query Conservation    
 










 

 
 
  
       
    
  
 
...   
      
  
Alig confidence 



















.





















...













Template Conservation        












 .
  

           
               
     
Template Sequence  PYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL
Template Known Secondary structure 
B
T.SS
S


SST




TTTTTTS
Template Predicted Secondary structure 


.
















Template SS confidence 



























































   189190.........200........ .210.........220.........230.........240.......
 
   596...600.........610.....
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  MNHCWKEKPEDRPPFSQLLS
Query Conservation 
  
   

  


   
  
Alig confidence 



















Template Conservation 
   
   
  
 
    
 
Template Sequence  INKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

Template Predicted Secondary structure 







Template SS confidence 



















   248.250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D