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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank315Aligned Residues209
% Identity22%Templatec3rnyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   389390.........400.........410........ .420.........430.........440.......
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Query Sequence  NKDKVAIKTIQEGAMSEEDFIEEAEVMMKL. SHPKLVQLYGVCLEQAPICLVFEFMEHGC
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Template Sequence  HNMEYAVKVID. . . . . . . KPSEEIEILLRYGQHPNIITLKDVY. . . . . . DLVTELMRGGE
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   437..440....... ..450.........460.........470.. .......480...
 
   448.450.........460.........470.........480.........490.........500.......
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Query Sequence  LSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACVIHRDLAARNCLVGENQVIKVSDFG
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Template Sequence  LLDKI. LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRI
Template Known Secondary structure  .TSSS


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   497..500. ........510.........520.........530.........540.........550.....
 
   508.510.........520.........530.........540.........550.........560....
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Query Sequence  MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY. . .
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Template Sequence  CDF. . . GFAKQLRAENGLLMTPCYTEVLKRQGYDEGCDIWSLGILLYTMLA. GYTPFANG
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   556.. .560.........570.........580.........590.........600... ......610.
 
   565....570......... 580.........590.........600.........610.....
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Query Sequence  ENRSNSEVVEDISTG. . . FRLYKPRLASCHVYQIMNHCWKEKPEDRPPFSQLLS
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Template Sequence  PSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ
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   618.620.........630.........640.........650.........660.........670.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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