Job Description Q03526 Confidence 100.00% Date Wed Jul 10 14:09:50 BST 2013 Rank 23 Aligned Residues 239 % Identity 23% Template c3qa8H_ PDB info PDB header:immune system, signaling protein Chain: H: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																						.																			.	.
Query SS confidence																						.																			.	.
Query Sequence		T	F	V	Q	E	I	G	S	G	Q	F	G	L	V	H	L	G	Y	W	L	.	N	K	D	K	V	A	I	K	T	I	Q	E	G	A	M	S	E	E	.	.	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V	Q
Query Conservation																						.																			.	.
Alig confidence																						.																			.	.
Template Conservation
Template Sequence		E	M	K	E	R	L	G	T	G	G	F	G	Y	V	L	R	W	I	H	Q	D	T	G	E	Q	V	A	I	K	Q	C	R	Q	E	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S
Template Known Secondary structure									B		S	S	S	B							T	T	T	T										S																						B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		426	.	.	.							430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																														.	.
Query SS confidence						.	.	.	.	.	.																														.	.
Query Sequence		L	Y	G	V	.	.	.	.	.	.	C	L	E	Q	A	P	I	C	L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	S	Q	R	G	L	.	.	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y
Query Conservation						.	.	.	.	.	.																														.	.
Alig confidence						.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		A	R	E	V	P	D	G	L	Q	K	L	A	P	N	D	L	P	L	L	A	M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y
Template Known Secondary structure							T	T	T					T	T	S	S									S	S		B							S	S	S		T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.				500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		L	E	K	A	C	V	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	.	.	.	V	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V
Query Conservation																								.	.	.
Alig confidence																								.	.	.																							.	.
Template Conservation																																																	.	.
Template Sequence		L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K	I	I	D	L	G	Y	A	K	E	L	D	Q	G	E	L	C	T	E	F	.	.	V	G	T	L	Q	Y	L	A	P	E	L
Template Known Secondary structure					T	T	B							S	T	T							S	S	S							S						B	T	T	S								.	.		S			T	T		S	S		S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.														.	580	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	F	S	R	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	R
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		L	E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F	E	C	I	T	.	G	F	R	P	F	L	P	N	W	Q	P	V	Q	W	H	G	K	V	R	I	V	V	Y	D	D	L	T	G	A	V	K	F	S	S	V
Template Known Secondary structure		S			S			S	T	T															S	.	S			S			S	S						S	S	T	T					S					S	S	S					S	S
Template Predicted Secondary structure																										.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		582	.	.	.	.	.	.					.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		L	Y	K	P	R	L	A	.	.	.	.	S	C	H	V	Y	Q	I	M	N	H	C	W	K	E	K	P	E	D	R	P	P	F
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		L	P	T	P	N	H	L	S	G	I	L	A	G	K	L	E	R	W	L	Q	C	M	L	M	W	H	Q	R	T	D	P	Q	N
Template Known Secondary structure		S			S					G	G	G												S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D