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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank48Aligned Residues239
% Identity24%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   370.........380....... ..390.........400.........410.........420........
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Query Sequence  FVQEIGSGQFGLVHLGYW. LNKDKVAIKTIQEGAMSEEDFIEEAEVMMKLSHPKLVQLYG
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Template Sequence  YFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFD
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   57..60.........70.........80.........90 .........100.........110....
 
   429430.........440.........450.........460.........470.........480........
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Query Sequence  VCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACVIHRDL
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Template Sequence  VFEDKKYFYLVTEFYEGGELFEQIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDI
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   133......140.........150.........160 .........170.........180.........190.
 
   489490..... ....500.........510.........520.........530.........540.....
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Query Sequence  AARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD
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Template Sequence  KPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCD
Template Known Secondary structure  SGGGSSTT

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   192.......200.........210.........220....... ..230.........240. .......
 
   546...550.........560.........570.........580...... ...590.........600..
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Query Sequence  VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR. . . LASCHVYQIMNHCWKE
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Template Sequence  VWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY
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   249250.........260. ........270.........280.........290.........300.......
 
   603......610.....
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Query Sequence  KPEDRPPFSQLLS
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Template Sequence  DYNKRCTAEEALN
Template Known Secondary structure  STTTS

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   308.310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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