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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank22Aligned Residues250
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380........ .390.........400.. .......410.....
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Query Sequence  WVIQPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGA. . . . MSEEDFIEEAEVM
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Template Sequence  PVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL
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   289290.........300.........310.........320.........330.........340........
 
   416.. .420.........430.........440.........450.........460.........470....
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Query Sequence  MKL. SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEG
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Template Sequence  ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR. FKEPHAVFYAAEIAIG
Template Known Secondary structure  T
TT

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B
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   395....400.........410.........420.........430....... ..440.........450...
 
   475....480.........490.........500.........510.........520.........530....
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Query Sequence  MAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV
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Template Sequence  LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKF. . CGTPDYIAPEI
Template Known Secondary structure  TS




STT
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TT



TT

B

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   454.....460.........470.........480.........490.........500 .........510.
 
   535....540.........550.........560.........570.........580.........590....
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Query Sequence  FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQ
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Template Sequence  IAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIME. HNVAYPKSMSKEAVA
Template Known Secondary structure  T


BST.SS
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   513......520.........530...... ...540.........550..... ....560.........570
 
   595....600.........610 .....
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Query Sequence  IMNHCWKEKPEDRPPF. . . . . SQLLS
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Template Sequence  ICKGLMTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  S
SSSTT
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   571........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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