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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank180Aligned Residues258
% Identity17%Templatec3p1aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   345....350.........360.........370.........380........ .390.........400...
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Query Sequence  SWRQKAPVTAGLRYGKWVIQPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGAM
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Template Sequence  EASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR
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S
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   87..90.........100.........110.........120.........130.........140......
 
   404.. ...410........ .420.........430.........440.........450.........
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Query Sequence  SEE. . . DFIEEAEVMMKL. SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLF
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Template Sequence  GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG. PSLQQHCEAWGASL
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   147..150.........160.........170.........180.........190. ........200.....
 
   460.........470.........480.........490.........500.........510.........
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Query Sequence  AAETLLGMCLDVCEGMAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS
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Template Sequence  PEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV. . . . . . . . E
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TT



SGGG
GGG



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   206...210.........220.........230.........240.........250...... .
 
   520.........530.........540.........550.........560.........570.........
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Query Sequence  STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG
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Template Sequence  LGVQEGDPRYMAPELL. QGSYGTAADVFSLGLTILEVAC. NMELPHG. . GEGWQQLRQGY
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GGG

GGGG.GT

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   258.260.........270... ......280.........290..... ....300.. .......310...
 
   580.........590.........600.........610.....
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Query Sequence  FRLYKPRLASCHVYQIMNHCWKEKPEDRPPFSQLLS
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Template Sequence  LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA
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TTS
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   320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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