Return to main results Retrieve Phyre Job Id

Job DescriptionQ03526
Confidence99.41%DateWed Jul 10 14:09:50 BST 2013
Rank475Aligned Residues105
% Identity23%Templatec3nsuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:phosphatidylinositol 4,5-bisphosphate-binding protein slm1; PDBTitle: a systematic screen for protein-lipid interactions in saccharomyces2 cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60.
Predicted Secondary structure 
















.














Query SS confidence 






































.



















Query Sequence  NFILLEEQLIKKSQQKRRTSPSNFKVRFFVLTKASLAYF. EDRHGKKRTLKGSIELSRIK
Query Conservation       
  
 

          
 
 
 



   
 
 .          
  
 
  
 
Alig confidence 

















.....















.



















Template Conservation     
  
 
 

    
 .....

 
 


    
 
                      
Template Sequence  FTEIKSGFLERRSKFLKS. . . . . YSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECT
Template Known Secondary structure 


S
SSSSS.....
SSSSS
TTT

S
SGGG
Template Predicted Secondary structure 







.....



















Template SS confidence 



























































   467..470.........480.... .....490.........500.........510.........520.
 
   62.......70.........80.........90.........100.........110......
Predicted Secondary structure 
























Query SS confidence 






















































Query Sequence  CVEIVKSDISIPCHYKYPFQTLVYLQVVHDNYLLYVFAPDCESRQRWVLTLKEET
Query Conservation   

 
             
     


      

  
    

  

  

   
Alig confidence 








....









































Template Conservation           ....                      
 
 
  
   
  

    
Template Sequence  VTEHSRKNS. . . . TSSPNSTGSDAKFVLHAKHNWVFKADSYESMMSWFDNLKILT
Template Known Secondary structure 



S....SSS

TTS
S



SSTT
Template Predicted Secondary structure 








....















Template SS confidence 






















































   522.......530 .........540.........550.........560.........570..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D