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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank151Aligned Residues245
% Identity24%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380........ .390......... 400.........410.........420
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQ. . . . EGAMSEEDFIEEAEVMMKLSH
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Template Sequence  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH
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   4950.........60.........70.........80.........90.........100........
 
   421........430.........440.........450.........460.........470.........480
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Query Sequence  PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEK
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Template Sequence  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI. ISRKRFSEVDAARIIRQVLSGITYMHK
Template Known Secondary structure  TTB


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S
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   109110.........120.........130.........140 .........150.........160.......
 
   481........490..... ....500.........510.........520.........530.......
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Query Sequence  ACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF
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Template Sequence  NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK. . IGTAYYIAPEVLH.
Template Known Secondary structure  TT


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   168.170.........180.........190.........200.........210. ........220....
 
   538.540.........550.........560.........570......... 580.........590....
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Query Sequence  SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG. . . FRLYKPRLASCHVYQ
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Template Sequence  GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD
Template Known Secondary structure  S


T.SS
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SGGGGGS
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   225....230.........240..... ....250.........260.........270.........280...
 
   595....600.........610.....
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Query Sequence  IMNHCWKEKPEDRPPFSQLLS
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Template Sequence  LIRKMLTYVPSMRISARDALD
Template Known Secondary structure  T
SSTTTS

T
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   284.....290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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