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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank163Aligned Residues234
% Identity21%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380....... ..390.........400.........410.........420.........430...
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Query Sequence  GSGQFGLVHLGYW. LNKDKVAIKTIQEGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ
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Template Sequence  VKEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEE
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   15....20.........30.........40.. .......50.........60.........70.
 
   434.....440.........450.........460.........470.........480.........490...
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Query Sequence  APICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACVIHRDLAARNC
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Template Sequence  SFHYLVFDLVTGGELFEDIVAREF. YSEADASHCIQQILESIAYCHSNGIVHRNLKPENL
Template Known Secondary structure  S




S
BSS.

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GGG
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   83......90.........100...... ...110.........120.........130.........140.
 
   494.. ...500.........510.........520.........530.........540.........550
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Query Sequence  LVG. . . ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG
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Template Sequence  LLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG. . YLSPEVLKKDPYSKPVDIWACG
Template Known Secondary structure  S
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TT


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B




S
TT..T

TT

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   142.......150.........160.........170....... ..180.........190.........
 
   551........560.........570......... 580.........590.........600.......
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Query Sequence  VLMWEVFSEGKIPYENRSNSEVVEDISTG. . . FRLYKPRLASCHVYQIMNHCWKEKPEDR
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Template Sequence  VILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR
Template Known Secondary structure  .SS
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SST




TTGGGGS
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   200....... ..210.........220.........230.........240.........250........
 
   608.610.....
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Query Sequence  PPFSQLLS
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Template Sequence  ITADQALK
Template Known Secondary structure 

TT
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   259260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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