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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank183Aligned Residues256
% Identity34%Templatec3kexA_
PDB info PDB header:transferaseChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390.. .......400... ......410....
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Query Sequence  VIQPSELTFVQEIGSGQFGLVHLGYWLNKDK. . . . . VAIKTIQEGAM. . SEEDFIEEAEV
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Template Sequence  IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA
Template Known Secondary structure  B

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   684.....690.........700.........710.........720.........730.........740...
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEG
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Template Sequence  IGSLDHAHIVRLLGLCPGSSL. QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG
Template Known Secondary structure  T


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BSS.

TT
BSSSGGGS
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   744.....750.........760.... .....770.........780.........790.........800..
 
   475....480.........490.........500.........510.........520.........530....
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Query Sequence  MAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV
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Template Sequence  MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLTPIK. . . . WMALES
Template Known Secondary structure  TT


S

SSTTSSSS

S
SGGGGS


TT




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   803......810.........820.........830.........840.........850.. ......
 
   535....540.........550.........560.........570.........580.........590....
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Query Sequence  FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQ
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Template Sequence  IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYM
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   864.....870.........880.........890.........900.........910.........920...
 
   595....600.........610.........620..
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Query Sequence  IMNHCWKEKPEDRPPFSQLLSQLAEIAE
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Template Sequence  VMVKCWMIDENIRPTFKELANEFTRMAR
Template Known Secondary structure  T
S
TTTS

TT
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   924.....930.........940.........950.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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