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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank147Aligned Residues229
% Identity28%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380........ .390.........400. ........410.........420.
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Query Sequence  PSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEG. . AMSEEDFIEEAEVMMKLSHP
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Template Sequence  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP
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   132.......140.........150.........160.........170.........180.........190.
 
   422.......430.........440.........450..... ....460.........470........
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Query Sequence  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQ. . . RGLFAAETLLGMCLDVCEGMAYL
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Template Sequence  NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF
Template Known Secondary structure  TB


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   192.......200.........210.........220.........230.........240.........250.
 
   479480.........490....... ..500.........510.........520.........530.....
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Query Sequence  EKACVIHRDLAARNCLVGE. . . NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF
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Template Sequence  HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . . . . . . . . . . LFKALYMAPEVF
Template Known Secondary structure  TT


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GGGG
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   252.......260.........270.........280...... ...290........
 
   536...540.........550.........560.........570.........580.........590.....
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Query Sequence  SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQI
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Template Sequence  K. RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKATY. . . . . . . KPLTPQAVDL
Template Known Secondary structure  G.T


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   310 .........320.........330. ........340.........350 .........360
 
   596...600.........610.....
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Query Sequence  MNHCWKEKPEDRPPFSQLLS
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Template Sequence  LKQMLTKDPERRPSAAQVLH
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T
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   370.........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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