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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank102Aligned Residues237
% Identity26%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380........ .390.........400.. .......410.........420
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGA. . . . MSEEDFIEEAEVMMKLSH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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STTTTT

GGG
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   74.....80.........90.........100.........110.........120.........130...
 
   421........430.........440.........450.........460.........470.........480
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Query Sequence  PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEK
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI. ILRQKFSEVDAAVIMKQVLSGTTYLHK
Template Known Secondary structure  TTB


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S
B.TT
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B
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   134.....140.........150.........160..... ....170.........180.........190..
 
   481........490..... ....500.........510.........520.........530.......
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Query Sequence  ACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF
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Template Sequence  HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGTA. . . . . . . . . . . YYIAPEVLR
Template Known Secondary structure  TT


SS

GGGSSS
TT


S


TTT


G...........GG

T
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   193......200.........210.........220.........230.. .......240.
 
   538.540.........550.........560.........570.........580..... ....590....
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Query Sequence  SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP. . . RLASCHVYQ
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Template Sequence  KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ
Template Known Secondary structure  T


T.SS
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TTTTTTS
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   250.........260.........270 .........280.........290.........300........
 
   595....600.........610.....
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Query Sequence  IMNHCWKEKPEDRPPFSQLLS
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Template Sequence  LVKLMLTYEPSKRISAEEALN
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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