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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank223Aligned Residues252
% Identity24%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   357..360.........370.........380......... 390.........400 .........410..
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Query Sequence  RYGKWVIQPSELTFVQEIGSGQFGLVHLGYWLN. KDKVAIKTIQE. . . GAMSEEDFIEEA
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Template Sequence  GGSLLELQ. KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEV
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B
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   0....... ..10.........20.........30.........40.........50........
 
   413......420.........430.........440.........450.......
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Query Sequence  EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRG. . . . . . . . . . . . . . .
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Template Sequence  RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI
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   62.......70.........80.........90.........100.........110.........120.
 
   458.460.........470.........480.........490.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . LFAAETLLGMCLDVCEGMAYLEKACVIHRDLAARNCLV
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Template Sequence  CPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF
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GGG
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   122.......130.........140.........150.........160.........170.........180.
 
   496... 500.........510.........520.........530......... 540.........550.
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Query Sequence  GENQ. . VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR. . YSSKSDVWSFGV
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Template Sequence  STNKSFEIKLVDFGLSKEFYKLNNGAGTPY. . . . . FVAPEVLNTTNESYGPKCDAWSAGV
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GG.....G

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   184.....190.........200.........210... ......220.........230........
 
   552.......560.........570......... 580.........590.........600........
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Query Sequence  LMWEVFSEGKIPYENRSNSEVVEDISTG. . . FRLYKPRLASCHVYQIMNHCWKEKPEDRP
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Template Sequence  LLHLLLM. GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF
Template Known Secondary structure  .SS
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TTSGGGGGS
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   247..250... ......260.........270.........280.........290.........300.....
 
   609610.....
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Query Sequence  PFSQLLS
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Template Sequence  DAMRALQ
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   306...310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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