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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank136Aligned Residues247
% Identity24%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.. .......380........ .390......... 400.........410.....
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Query Sequence  VIQPSELTFVQ. EIGSGQFGLVHLGYWL. NKDKVAIKTIQ. . . . EGAMSEEDFIEEAEVM
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ
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GGG


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   82.......90.........100.........110.........120.........130.........140.
 
   416...420.........430.........440.........450.........460.........470.....
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Query Sequence  MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGM
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Template Sequence  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR. FDEQRSATFMEELADAL
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   146...150.........160.........170.........180....... ..190.........200....
 
   476...480.........490.........500.........510.........520.........530.....
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Query Sequence  AYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF
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Template Sequence  HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRM. . . . CGTLDYLPPEMI
Template Known Secondary structure  TT



SGGG
TT




TT

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B

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   205....210.........220.........230.........240........ .250.........260
 
   536...540.........550.........560.........570.........580.........590.....
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Query Sequence  SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQI
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Template Sequence  EGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. DLKFPPFLSDGSKDL
Template Known Secondary structure  TT

B
TT.SS
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   262.......270.........280.... .....290.........300.... .....310.........
 
   596...600.........610.....
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Query Sequence  MNHCWKEKPEDRPPFSQLLS
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Template Sequence  ISKLLRYHPPQRLPLKGVME
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   320.........330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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