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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank93Aligned Residues245
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380......... 390........ .400.........410.........420...
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWLN. KDKVAIKTI. QEGAMSEEDFIEEAEVMMKLSHPKL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
S
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BTTB
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   26...30.........40.........50.........60.........70.........80.....
 
   424.....430.........440.........450.........460.........470.........480...
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Query Sequence  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACV
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERV. VHKRVFRESDAARIMKDVLSAVAYCHKLNV
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SS



SGGGGG.TTTSS

TT
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   86...90.........100.........110.... .....120.........130.........140....
 
   484.....490..... ....500.........510.........520.........530.........540
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Query Sequence  IHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY
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Template Sequence  AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG. . TPYYVSPQVLEGL. Y
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SGGGSSSSTT




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B



S..
GGGS
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   145....150.........160.........170.........180....... ..190.........200 .
 
   541........550.........560.........570.........580..... ....590........
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Query Sequence  SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP. . RLASCHVYQIMNH
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Template Sequence  GPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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TT.SS
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   202.......210......... 220.........230.........240.........250.........260
 
   599600.........610.....
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Query Sequence  CWKEKPEDRPPFSQLLS
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   262.......270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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