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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank110Aligned Residues233
% Identity16%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380........ .390.........400..... ....410.........420...
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Query Sequence  LTFVQEIGSGQFGLVHLGYWL. . NKDKVAIKTIQEGAMSE. . EDFIEEAEVMMKLSHPKL
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Template Sequence  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI
Template Known Secondary structure  TTGGGTTS
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GGGGG


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   151........160.........170.........180.........190.........200.........210
 
   424.....430.. .......440.........450.........460.........470........
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Query Sequence  VQLYGVCLE. . . . . QAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYL
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Template Sequence  VQIFNFVEHTDRHGDPVGYIVMEYVGGQSL. . . . . . . KQKLPVAEAIAYLLEILPALSYL
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   211........220.........230.........240 .........250.........260...
 
   479480.........490.........500.........510.........520.........530........
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Query Sequence  EKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS
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Template Sequence  HSIGLVYNDLKPENIMLTEEQ. LKLIDLGAVSRINSF. . . . . GYLYGTPGFQAPEIVRTG
Template Known Secondary structure  TT



SGGG
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   268.270.........280........ .290.........300... ......310.........320.
 
   539540.........550.........560.........570.........580.........590........
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Query Sequence  RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQIMNH
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Template Sequence  P. TVATDIYTVGRTLAALTL. DLPTRNGRYVDGL. . . . . . . PEDDPVLKTYDSYGRLLRR
Template Known Secondary structure  S.
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   322 .......330.........340 .........350... ......360.........370..
 
   599600....... ..610.........620..
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Query Sequence  CWKEKPEDR. PPFSQLLSQLAEIAE
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Template Sequence  AIDPDPRQRFTTAEEMSAQLTGVLR
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   373......380.........390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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