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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank208Aligned Residues244
% Identity22%Templatec2jedA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c theta; PDBTitle: the crystal structure of the kinase domain of the protein2 kinase c theta in complex with nvp-xaa228 at 2.32a3 resolution.
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380......... 390......... 400.........410.......
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Query Sequence  IQPSELTFVQEIGSGQFGLVHLGYWLN. KDKVAIKTIQ. . . . EGAMSEEDFIEEAEVMMK
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Template Sequence  LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL
Template Known Secondary structure 

GGGTTTTT

TT
TT
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   375....380.........390.........400.........410.........420.........430....
 
   418.420.........430.........440.........450.........460.........470......
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Query Sequence  . LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMA
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Template Sequence  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH. KFDLSRATFYAAEIILGLQ
Template Known Secondary structure  GGGSTTB


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BS.S

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   435....440.........450.........460.........470.... .....480.........490...
 
   477..480.........490.........500.........510.........520.........530......
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Query Sequence  YLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS
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Template Sequence  FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK. ENMLGDAKTNEFCGTPDYIAPEILL
Template Known Secondary structure  TT
B




GGG
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TT
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TT

B



S
GGG

T
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   494.....500.........510.........520....... ..530.........540.........550..
 
   537..540.........550.........560.........570.........580.........590......
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Query Sequence  FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASCHVYQIM
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Template Sequence  GQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRM. DNPFYPRWLEKEAKDLL
Template Known Secondary structure  T

B
T.SS
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TTS
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   553......560.........570.... .....580.........590... ......600.........610
 
   597..600.........610
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Query Sequence  NHCWKEKPEDRPPF
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Template Sequence  VKLFVREPEKRLGV
Template Known Secondary structure 

SSGGGSBTT
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   611........620....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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