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Job DescriptionQ03526
Confidence99.70%DateWed Jul 10 14:09:50 BST 2013
Rank403Aligned Residues108
% Identity14%Templatec2d9zA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein kinase c, nu type; PDBTitle: solution structure of the ph domain of protein kinase c, nu2 type from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  NNFILLEEQLIKKSQQKRRTSPSNFKVRFFVLTKASLAYFEDRHGKKRTLKGSIELSRIK
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Template Sequence  SSGMVKEGWMVHY. . . . . TSRDNLRKRHYWRLDSKCLTLFQN. . ESGSKYYKEIPLSEIL
Template Known Secondary structure 
TTS.....SS



SS
S
..SS

S



TTT

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   5....10....... ..20.........30.........40. ........50.......
 
   62.......70.........80.........90.........100. .....
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Query Sequence  CVEIVKSDISIPCHYKYPFQTLVYLQVVHDNYLLYVFAPD. . . . . . . . . . . . . . . CESRQ
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Template Sequence  RISSPRDFT. . . . . NISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQ
Template Known Secondary structure 

TT


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S
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B

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S

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B
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   58.60...... ...70.........80.........90.........100.........110..
 
   107..110.........120.
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Query Sequence  RWVLTLKEETRNNNS
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Template Sequence  SWEKAIRQALMSGPS
Template Known Secondary structure  S

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   113......120.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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