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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank179Aligned Residues248
% Identity26%Templatec2cn5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: crystal structure of human chk2 in complex with adp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380........ .390.........400.........410.........420...
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Query Sequence  PSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGAMSEEDFIEEAEVMMKLSHPKL
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Template Sequence  RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRN. . . . . VETEIEILKKLNHPCI
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   217..220.........230.........240.........250..... ....260.........270.
 
   424.....430.........440.........450.........460.........470.........480...
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Query Sequence  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACV
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Template Sequence  IKIKN. FFDAEDYYIVLELMEGGELFDKV. VGNKRLKEATCKLYFYQMLLAVQYLHENGI
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TT
BGGGGT.
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   286...290 .........300.........310... ......320.........330.........340...
 
   484.....490....... ..500.........510.........520.........530.......
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Query Sequence  IHRDLAARNCLVGE. . . NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF. . .
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Template Sequence  IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC. . GTPTYLAPEVLVSVGT
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GGGSSSSSS




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   344.....350.........360.........370.........380..... ....390.........400.
 
   538.540.........550.........560..... ....570.........580..... ....590...
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Query Sequence  SRYSSKSDVWSFGVLMWEVFSEGKIPYE. NRSNSEVVEDISTGFRLYKP. . . RLASCHVY
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Template Sequence  AGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL
Template Known Secondary structure  TT
TT.SS
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   402.......410.........420.. .......430.........440.........450.........460
 
   594.....600.........610..... ....620..
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Query Sequence  QIMNHCWKEKPEDRPPFSQLLS. . . . . . . . . . . QLAEIAE
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Template Sequence  DLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS
Template Known Secondary structure  S
SSTTTS

TSGGG

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   461........470.........480.........490.........500
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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