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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank109Aligned Residues247
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380........ .390.........400...... ...410.........420
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Query Sequence  PSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIQEGAMSEE. . . DFIEEAEVMMKLSH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........
 
   421........430.........440.........450.........460.........470.........480
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Query Sequence  PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEK
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDI. VAREFYSEADASHCIQQILESIAYCHS
Template Known Secondary structure  TTB


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S
B.TT
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   70.........80.........90.........100. ........110.........120........
 
   481........490...... ...500.........510.........520.........530.......
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Query Sequence  ACVIHRDLAARNCLVG. . . ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF
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Template Sequence  NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF. . AGTPGYLSPEVLKK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

B


S..
S
GGG

T
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   129130.........140.........150.........160.........170.. .......180......
 
   538.540.........550.........560.........570.........580..... ....590....
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Query Sequence  SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP. . . RLASCHVYQ
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Template Sequence  DPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
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B
T.SS
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   188.190.........200........ .210.........220.........230.........240......
 
   595....600.........610.....
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Query Sequence  IMNHCWKEKPEDRPPFSQLLS
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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