Job Description Q03526 Confidence 99.87% Date Wed Jul 10 14:09:50 BST 2013 Rank 341 Aligned Residues 164 % Identity 24% Template c2b3oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	I	A	L	Y	D	Y	Q	T	N	D	P	Q	E	L	A	L	R	C	D	E	E	Y	Y	L	L	D	.	S	S	E	I	H	W	W	R	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	V
Template Known Secondary structure									S	S	S	S	S									T	T										S	S	S					T	T	S				S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		D	K	N	G	H	E	G	Y	A	P	S	S	Y	L	V	E	K	S	P	N	N	L	E	T	Y	E	W	Y	N	K	S	I	S	R	D	K	A	E	K	L	L	L	D	T	G	K	E	G	A	F	M	V	R	D	S	.	R	T	P	G
Query Conservation																																																									.
Alig confidence																				.	.																																				.
Template Conservation																				.	.
Template Sequence		L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	.	.	D	P	T	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G
Template Known Secondary structure		B			S	S	S			B										.	.		G	G	G		T	T	B		T	T																T	T								S	S	S	T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.					.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		T	Y	T	V	S	V	F	T	K	A	I	I	S	E	N	P	C	I	K	H	Y	H	I	K	E	T	N	D	S	P	K	R	Y	Y	V	A	E	K	Y	V	F	D	S	I	P	L	L	I	Q	Y	H	Q	Y	N	.	.	.	.	G	G
Query Conservation																																																								.	.	.	.
Alig confidence																.															.	.	.																							.	.	.	.
Template Conservation																.															.	.	.
Template Sequence		D	F	V	L	S	V	L	S	D	Q	P	K	S	P	.	L	R	V	T	H	I	K	V	M	C	E	G	G	R	.	.	.	Y	T	V	G	G	L	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K	T	G	I	E	E	A	S
Template Known Secondary structure																.									B			T	T	S	.	.	.	B	B	S	S	S	S			B	S	S																S	S
Template Predicted Secondary structure																.															.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	T	R	L	R	Y	P	V	C	S	W	R	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	F	V	Y	L	R	Q	P	Y	Y	A	T	R	V	N	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D