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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank257Aligned Residues241
% Identity20%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370... ......380........ .390......... 400.........410........ .420.
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Query Sequence  SELTFVQE. IGSGQFGLVHLGYWL. NKDKVAIKTIQ. EGAMSEEDFIEEAEVMMKL. SHP
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKA
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Template Sequence  NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR. HFNELEASVVVQDVASALDFLHNK
Template Known Secondary structure  TB


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   141........150.........160.........170..... ....180.........190.........
 
   482.......490.........500.........510.........520.........530.........540.
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Query Sequence  CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS
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Template Sequence  GIAHRDLKPENILCEHPNQVSPVKICDFGPCGSAEYMAPE. . . . . . . VVEAFSEEASIYD
Template Known Secondary structure  T


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GGG
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   200.........210.........220.........230......... 240.........250..
 
   542.......550.........560.........570. ........580.......
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Query Sequence  SKSDVWSFGVLMWEVFSEGKIPYENRSNSE. . . . . . . . . . VVEDISTGFRLYKPRL. . . .
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Template Sequence  KRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  T.SS
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   274.....280.........290 .........300.........310.........320.........330..
 
   588.590.........600.........610.....
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Query Sequence  ASCHVYQIMNHCWKEKPEDRPPFSQLLS
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Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
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   337..340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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