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Job DescriptionQ03526
Confidence100.00%DateWed Jul 10 14:09:50 BST 2013
Rank27Aligned Residues248
% Identity17%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380......... 390.........400...... ...410....
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Query Sequence  IQPSELTFVQEIGSGQFGLVHLGYWLN. KDKVAIKTIQEGAMSEE. . . . . . . DFIEEAEV
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Template Sequence  LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL
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GGG
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   186...190.........200.........210.........220.........230.........240.....
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEG
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Template Sequence  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV. FSEADMRFYAAEIILG
Template Known Secondary structure  SSS

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TT


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   246...250.........260.........270.........280........ .290.........300....
 
   475....480.........490.........500.........510.........520.........530....
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Query Sequence  MAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV
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Template Sequence  LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG. . . YMAPEV
Template Known Secondary structure  TT




GGG
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   305....310.........320.........330.........340.........350..... ....360.
 
   535 ....540.........550.........560...... ...570.........580.........590.
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Query Sequence  F. SFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN. . RSNSEVVEDISTGFRLYKPRLASCH
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Template Sequence  LQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE
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T.SS
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   362.......370.........380...... ...390.........400.........410.........420
 
   592.......600........ .610.....
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Query Sequence  VYQIMNHCWKEKPEDRP. . . . . PFSQLLS
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Template Sequence  LRSLLEGLLQRDVNRRLGCLGRGAQEVKE
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   421........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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