Job Description Q64143 Confidence 96.39% Date Wed Jul 10 14:20:57 BST 2013 Rank 136 Aligned Residues 149 % Identity 17% Template c3ojaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex Resolution 2.70 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	Q	E	F	H	S	Q	Y	Q	E	K	S	K	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	H	T	Q	E	Q	H	S	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	E	C	E	R	E	N	Q	A	R	Q	R	E	I	D	A	L	K	E	Q	Y	R	T	V	I	D	Q	V	T	L	R	K	Q	A	K	I	T	L	E	Q	K	K	K	A	L	D	E	Q	V	S	N	G	R	R	A	H	A	E
Template Known Secondary structure																								T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.														.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	E	R	F	R	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	E	K	E	I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	L	R	L	E	Q	D	L	K	K	Q	A	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	G	T	L	Q	Q	A	V	G	Q	I	E	L	Q	H	A	T	E	E	Q	S	P	L	Q	L	L	R	A	I	V	K	R	Y	E	E	M	Y	V	E	Q	Q	S	V	Q	N	N	A	I	R	D	W	D	M	Y	Q	H	K	E	T
Template Known Secondary structure										T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q	L	R	K	I	R	D	Q	H	L	V	W	L	N	H	R	G	V	R	Q	R	R	L	N	A	W	L	G
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		Q	L	A	E	E	N	A	R	L	K	K	L	N	G	E	A	D	L	A	L	A	S	A	N	A	T	L	Q	E	L	V	.	.	.	V	R	E	Q	N	L	A	S	Q	L	G
Template Known Secondary structure																																	.	.	.
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.				.	500	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D