Job Description Q64143 Confidence 65.00% Date Wed Jul 10 14:20:57 BST 2013 Rank 210 Aligned Residues 104 % Identity 14% Template c2e7sM_ PDB info PDB header:endocytosis/exocytosis Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain Resolution 3.00 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		V	G	K	N	L	Q	E	F	H	S	Q	Y	Q	.	.	.	E	K	S	K	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	H	T	Q
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		L	E	E	Q	L	N	K	S	L	K	T	I	A	S	Q	K	A	A	I	E	N	Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A
Template Known Secondary structure																																						T	T																						T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	H	S	K	D	Y	I	E	R	F	R	R	E	G	N	E	K	E	I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	L	R	L	E	Q	D	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		E	E	E	A	D	K	L	N	K	E	V	E	.	D	L	T	A	S	L	F	D	E	A	N	N	L	V	A	D	A	R	X	E	K	Y	A	I	E	I	L	N	K	R	L	T	E	Q	L
Template Known Secondary structure		T	T	T					T	T	T			.																								T	T	G	G	G						T	T
Template Predicted Secondary structure														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D