Job Description Q64143 Confidence 99.85% Date Wed Jul 10 14:20:57 BST 2013 Rank 55 Aligned Residues 98 % Identity 29% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																										.										.
Query SS confidence																										.										.
Query Sequence		Y	D	E	K	T	W	F	V	E	D	I	N	R	V	Q	A	E	D	L	L	Y	G	K	P	.	D	G	A	F	L	I	R	E	S	.	S	K	K	G	C	Y	A	C	S	V	V	A	D	G	E	V	K	H	C	V	I	Y	S	T	A
Query Conservation																										.										.
Alig confidence																										.										.
Template Conservation
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	T	T								S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		411	.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		R	G	Y	G	F	A	E	P	.	.	.	.	.	Y	N	L	Y	S	S	L	K	E	L	V	L	H	Y	Q	Q	T	S	L	V	Q	H	N	D	S	L	N	V	R	L	A	Y	P	V	H	A	Q
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																			.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	.	.	.	.	.	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K
Template Known Secondary structure		T	S							S	T	T	S						S	S								T	T	S	S		.	.	.	.	.	S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D