Job Description Q64143 Confidence 97.87% Date Wed Jul 10 14:20:57 BST 2013 Rank 115 Aligned Residues 193 % Identity 14% Template c1ei3C_ PDB info PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen; PDBTitle: crystal structure of native chicken fibrinogen Resolution 5.50 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	E	D	N	I	D	A	V	G	K	N	L	Q	E	F	H	S	Q	Y	Q	E	K	S	K	E	Y	D	R	L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	T	R	E	N	C	C	I	L	D	E	R	F	G	S	Y	C	P	T	T	C	G	I	A	D	F	F	N	K	Y	R	L	T	T	D	G	E	L	L	E	I	E	G	L	L	Q	Q	A	T	N	S	T	G	S	I	E	Y	L	I
Template Known Secondary structure															S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	C	H	T	Q	E	Q	H	S	K	D	Y	I	E	R	F	R	R	E	G	N	E	K	E	I	E	R	I	M	M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	L	R	L	E	Q	D	L	K	K	Q	A	L	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	I	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	P	S	E	K	Q	T	L	P	Q	S	I	E	Q	L	T	Q	K	S	K	K	I	I	E	E	I	I	R	Y	E	N	T	I	L	A	H	E	N	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	S	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.																.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q	L	R	K	I	R	D	Q	H	L	V	W	L	N	H	R	G	V	R	Q	R	R	L	N	A	W	L	G	I	K	N	E	D	S	D	E	S	Y	F	I	N	E	E	D
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	Q	L	T	D	M	H	I	M	N	S	N	K	I	T	Q	L	K	Q	K	I	A	Q	L	E	S	H	C	Q	E	P	C	K	D	T	A	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																													T	T		S					S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	N	L	P	H	Y	D	E	K	T	W	F	V	E	D	I	N	R	V	Q	A	E	D	L	L	Y	G	.	K	P	D	G	A	F	L	I	R	E	S	S	K	K	G	C	Y	A	C	S	V	V	A	D	G	E	V	K	H	C	V	I
Query Conservation																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.																				.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	E	T	T	G	R	D	C	Q	D	I	A	N	K	G	A	R	K	S	G	L	Y	F	I	K	P	Q	K	A	K	Q	S	F	L	V	.	.	.	.	.	.	.	.	.	Y	C	E	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S			B	S	S							T	T					S							S	S		S	S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
														146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	T	A	R	G	Y	G	F	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	Y	G	N	G	W	T	V	L	Q
Template Known Secondary structure			T	T	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D