Job Description Q64143 Confidence 89.74% Date Wed Jul 10 14:20:57 BST 2013 Rank 157 Aligned Residues 159 % Identity 9% Template c1deqD_ PDB info PDB header:blood clotting Chain: D: PDB Molecule:fibrinogen (alpha chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) Resolution 3.50 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	E	Y	T	R	T	S	Q	E	I	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E	E	Q	C	H	T	Q	E	Q	H	S	K	D	Y	I	E	R	F	R	R	E	G	N	E	K	E	I	E	R	I	M
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		M	K	G	L	I	D	E	V	D	Q	D	F	T	S	R	I	N	K	L	R	D	S	L	F	N	Y	Q	K	N	S	K	D	S	N	T	L	T	K	N	I	V	E	L	M	R	G	D	F	A	K	A	N	N	N	D	.	N	T	F	K
Template Known Secondary structure							T	T	S	S								T	T	G	G	G	S							T	T	S	S	S								T	T	T	T												.
Template Predicted Secondary structure																																																									.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	Y	D	K	L	K	S	R	L	G	E	I	H	D	S	K	L	R	L	E	Q	D	L	K	K	Q	A	L	D	N	R	E	I	D	K	K	M	N	S	I	K	P	D	L	I	Q	L	R	K	I	R	D	Q	H	L	V	W	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	N	E	D	L	R	S	R	I	E	I	L	R	R	K	V	I	E	Q	V	Q	R	I	N	L	L	Q	K	N	V	R	D	Q	L	V	D	M	K	R	L	E	V	D	I	D	I	K	I	R	S	C	K	G	S	C	S	R	A	L
Template Known Secondary structure																																																							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	G	V	R	Q	R	R	L	N	A	W	L	G	I	K	N	E	D	S	D	E	S	Y	F	I	N	E	E	D	E	N	L	P	H	Y	D	E	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	K	V	D	L	E	D	Y	K	N	Q	Q	K	Q	L	E	Q	V	I	A	I	N	L	L	P	S	R	D	I	Q	Y	L	P	I	L	K	M	S	T
Template Known Secondary structure																																			G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D