Job Description A2A5K6 Confidence 99.91% Date Tue Jul 30 13:04:49 BST 2013 Rank 6 Aligned Residues 80 % Identity 19% Template c1x6hA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional repressor ctcf; PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf Resolution UNK Model Dimensions (Å) X:41.288 Y:46.195 Z:34.379

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		1033	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.					1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		E	M	E	S	H	K	R	A	H	A	G	P	A	A	F	K	C	P	D	C	P	F	S	A	R	Q	W	P	E	V	R	A	H	M	A	Q	H	.	.	.	.	S	S	L	R	P	H	Q	C	N	Q	C	S	F	A	S	K	N	K	K
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.
Template Conservation
Template Sequence		S	S	G	S	S	G	R	T	H	T	G	E	K	P	Y	A	C	S	H	C	D	K	T	F	R	Q	K	Q	L	L	D	M	H	F	K	R	Y	H	D	P	N	F	V	P	A	A	F	V	C	S	K	C	G	K	T	F	T	R	R	N
Template Known Secondary structure		T	T	T			S	T	T										S	S	S	S				S	S											T	T		S	S									S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	R	H	M	L	T	H	T	N	E	K	P	F	S	C	H	V	C	G	Q	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	A	R	H	A	D	N	C	A	G	P	D	G	V	E	G	E	N	S	G	P	S	S
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D