Job Description P47941 Confidence 100.00% Date Wed Jul 10 14:10:41 BST 2013 Rank 6 Aligned Residues 157 % Identity 37% Template c3qwyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 Resolution 2.52 Å Model Dimensions (Å) X:51.380 Y:48.812 Z:37.756

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.
Predicted Secondary structure																														.	.																									.	.	.
Query SS confidence																														.	.																									.	.	.
Query Sequence		R	F	D	S	S	D	R	S	A	W	Y	M	G	P	V	T	R	Q	E	A	Q	T	R	L	Q	G	Q	R	.	.	H	G	M	F	L	V	R	D	S	S	T	C	P	G	D	Y	V	L	S	V	S	E	N	S	.	.	.	R	V	S
Query Conservation																														.	.																									.	.	.
Alig confidence																														.	.												.													.	.	.
Template Conservation																																											.
Template Sequence		G	F	D	P	F	E	W	R	S	F	Y	F	P	G	M	S	R	E	E	A	H	K	L	L	G	E	P	Q	V	S	I	G	T	F	L	M	R	D	S	S	R	.	P	G	E	Y	S	L	T	V	R	E	A	D	E	G	N	A	V	C
Template Known Secondary structure					G	G	G	G	G	G	G			T	T												S	T	T			T	T								S	S	.	T	T										S	S	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		H	Y	I	I	N	S	L	P	N	.	.	.	.	.	.	.	R	R	F	K	I	G	D	Q	E	F	D	H	L	P	A	L	L	E	F	Y	K	I	H	Y	L	D	T	T	T	L	I	E	P	A	P	R	Y	P	S	P	P	V	G	S
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		H	Y	L	I	E	R	G	E	P	K	E	D	G	T	A	A	A	G	V	K	I	A	N	Q	S	F	P	D	I	P	A	L	L	N	H	F	K	M	R	V	L	T	E	A	S	L	L	A	A	Y	K	K	P	I	.	.	.	.	.	.
Template Known Secondary structure												T	T	T	T								T	T				S	S											S		S	S	S												.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	P	N	L	P	T	A	E	E	N	L	E	Y	V	R	T	L	Y	D	F	P	G	N	D	A	E	D	L	P	F	K	K	G	E	L	L	V	I	I	E	K	P	E	E	Q	W	W	S	A	R	N	K	D	G	R	V	G	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	E	V	V	V	G	T	F	K	F	T	G	E	R	E	T	D	L	P	F	E	Q	G	E	R	L	E	I	L	S	K	T	N	Q	D	W	W	E	A	R	N	A	L	G	T	T	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.							S	S		B			S	S	T	T	B			B		T	T										S	S	S							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		173	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	P	Y	V	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	A	N	Y	V	Q	I
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D