 |
| Job Description | P47941 | | Confidence | 99.71% | Date | Wed Jul 10 14:10:41 BST 2013 |
| Rank | 114 | Aligned Residues | 84 |
| % Identity | 20% | Template | c3nmzD_ |
| PDB info |
PDB header:cell adhesion/cell cycle | Chain: D: PDB Molecule:rho guanine nucleotide exchange factor 4; |
PDBTitle: crytal structure of apc complexed with asef
|
| Resolution | 3.01 Å |
|
 |
|   |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | T | P | L | P | T | V | A | S | T | P | G | A | A | I | N | P | L | P | S | T | Q | N | G | P | V | F | A | K | A | I | Q | K | R | V | P | C | A | Y | D | K | T | A | L | A | L | E | V | G | D | I | V | K | V | T | R | M | N | I | N |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   | . | . |
|   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
| Template Sequence |   |
S | H | H | Y | S | H | P | G | G | G | G | E | Q | L | A | I | N | E | L | I | S | D | G | S | V | V | C | A | E | A | L | W | D | H | V | . |
. |
T | M | D | D | Q | E | L | G | F | K | A | G | D | V | I | E | V | M | D | A | T | N | R |
| Template Known Secondary structure |   |
|
|
| S |
|
|
| S |
| S |
|
|
|
| S |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  | S | S |
| B |
| . | . |
|
|
| T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| S | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | W | E | G | E | V | N | G | R | K | G | L | F | P | F | T | H | V | K | I | F | D | P | Q | N |
| Query Conservation |   |
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |
| Template Sequence |   |
E | W | W | W | G | R | V | A | D | G | E | G | W | F | P | A | S | F | V | R | L | R | V | N | Q | D |
| Template Known Secondary structure |   |
S |  |  |  |  |  |
| S | S |
|  |  |  |  |  | G | G | G |  |  |  |
|
| S |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|