Job Description P47941 Confidence 99.91% Date Wed Jul 10 14:10:41 BST 2013 Rank 57 Aligned Residues 123 % Identity 21% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		M	S	S	A	R	F	D	S	S	.	.	.	.	D	R	S	A	W	Y	M	G	P	V	T	R	Q	E	A	Q	T	R	L	Q	G	Q	R	H	G	M	F	L	V	R	D	S	S	T	C	P	G	D	Y	V	L	S	V	S	E	N	S
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		M	V	Q	S	S	L	T	E	E	L	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G
Template Known Secondary structure																		T		B			S										T	T	T	S		T	T								S	S	T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		R	V	S	H	Y	I	I	N	S	L	P	N	R	R	F	K	I	.	.	.	G	D	Q	E	F	D	H	L	P	A	L	L	E	F	Y	K	I	H	Y	L	D	T	T	T	L	I	E	P	A	P	R	Y	P	S	P	P	V	G	S	V
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		K	T	L	H	T	R	I	E	H	S	N	G	R	F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V	R
Template Known Secondary structure												T	T					T	T			S				B	S	S															T						S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	N	L	P	T	A	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	N	P	V	S	R	F	M	Q
Template Known Secondary structure					B			S	S
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D