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Job DescriptionP47941
Confidence99.56%DateWed Jul 10 14:10:41 BST 2013
Rank241Aligned Residues62
% Identity23%Templatec2lcsA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:nap1-binding protein 2; PDBTitle: yeast nbp2p sh3 domain in complex with a peptide from ste20p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160..... ....170.........180...
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Query Sequence  LEYVRTLYDFPGNDAEDLPFKKGELLVIIEKPEEQWWSARN. KDGRVGMIPVPYVEKLVR
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Template Sequence  NQRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQP
Template Known Secondary structure 
SS
B

SSTTB

B
TT
TTT
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STT

S
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   1........10.........20.........30.........40.........50.........60
 
   184..
Predicted Secondary structure 


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Query Sequence  SSP
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Template Conservation 
 
Template Sequence  ELE
Template Known Secondary structure  S

Template Predicted Secondary structure 


Template SS confidence 


   61..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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