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Job DescriptionP47941
Confidence100.00%DateWed Jul 10 14:10:41 BST 2013
Rank2Aligned Residues285
% Identity61%Templatec2eyzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: ct10-regulated kinase isoform ii
ResolutionUNK
Model Dimensions (Å)X:62.833 Y:63.731 Z:50.265

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MSSARFDSSDRSAWYMGPVTRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSH
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Template Sequence  MAGN. FDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSH
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   1... .....10.........20.........30.........40.........50.........
 
   61........ 70.........80.........90.........100...
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Query Sequence  YIINSLPNR. . . . . . . . . . . . . . . . . RFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAP
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Template Sequence  YIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVS
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SS

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BTTB

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   60.........70.........80.........90.........100.........110.........
 
   104.....110.........120.........130.........140.........150.........160...
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Query Sequence  RYPSPPVGSVSAPNLPTAEENLEYVRTLYDFPGNDAEDLPFKKGELLVIIEKPEEQWWSA
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Template Sequence  RSRQGSGVILRQEE. . . . . . . AEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNA
Template Known Secondary structure  S
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   120.........130... ......140.........150.........160.........170..
 
   164.....170.........180.........190.........200.........210.........220...
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Query Sequence  RNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPTVASTP
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Template Sequence  EDSEGKRGMIPVPYVEKYRPASASVSA. . . . . . . . . LIGGNQEGSHPQPLGGPEPGPYAQ
Template Known Secondary structure 
TTS
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   173......180.........190......... 200.........210.........220...
 
   224.....230.........240.........250.........260.........270.........280...
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Query Sequence  GAAINPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRK
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Template Sequence  PSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKR
Template Known Secondary structure  SSSS
SSS

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S

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   224.....230.........240.........250.........260.........270.........280...
 
   284.....290.........300..
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Query Sequence  GLFPFTHVKIFDPQNPDDN
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Template Sequence  GHFPFTHVRLLDQQNPEED
Template Known Secondary structure 


TTS


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TT

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   284.....290.........300..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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