Return to main results Retrieve Phyre Job Id

Job DescriptionP47941
Confidence99.87%DateWed Jul 10 14:10:41 BST 2013
Rank92Aligned Residues111
% Identity26%Templatec2dm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase txk; PDBTitle: solution structure of the sh2 domain of human tyrosine-2 protein kinase txk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20........ .30.........40.........50... .
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Query Sequence  SSARFDSSDRSAWYMGPVTRQEAQTRL. QGQRHGMFLVRDSSTCPGDYVLSVS. . . . . . E
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Template Sequence  SGNKITNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGS. YTISVFMGARRST
Template Known Secondary structure  SS

S


TTSSSB

S


STT
B
TT.


SSSS
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   6...10.........20.........30.........40.........50. ........60....
 
   55....60.........70..... ....80.........90.... .....100.........110..
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Query Sequence  NSRVSHYIINSLPNRRFKIGD. QEFDHLPALLEFYKIHYLD. TTTLIEPAPRYPSPPVGS
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Template Sequence  EAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQHNAAGLMTRLRYPVGLMGSSGPSS
Template Known Secondary structure  S


TT

SSSS


SSTT


SSS



SB

SS
S




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   65....70.........80.........90.........100.........110.........120....
 
   113
Predicted Secondary structure 
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Query Sequence  V
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Template Sequence  G
Template Known Secondary structure 
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   125
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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