Return to main results Retrieve Phyre Job Id

Job DescriptionP47941
Confidence99.61%DateWed Jul 10 14:10:41 BST 2013
Rank181Aligned Residues66
% Identity15%Templatec2ct3A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the sh3 domain of the vinexin protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160....... ..170.........
Predicted Secondary structure 





























.






Query SS confidence 














































.











Query Sequence  AEENLEYVRTLYDFPGNDAEDLPFKKGELLVIIEKPEEQWWSARNKD. GRVGMIPVPYVE
Query Conservation         
 




 
   




  



 

   
  

      .
  
  
 



Alig confidence 














































.











Template Conservation           

  
 
    


   

 
 
      

        
  
  
  

 
Template Sequence  SGSSGTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVA
Template Known Secondary structure 




SS
B

SSTTB

B
TT
SSS
SSS


TTT
Template Predicted Secondary structure 




























Template SS confidence 



























































   3......10.........20.........30.........40.........50.........60..
 
   180......
Predicted Secondary structure 





Query SS confidence 






Query Sequence  KLVRSSP
Query Conservation         
Alig confidence 






Template Conservation   
     
Template Sequence  PVSGPSS
Template Known Secondary structure  TT
S

Template Predicted Secondary structure 





Template SS confidence 






   63......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D