Return to main results Retrieve Phyre Job Id

Job DescriptionP47941
Confidence99.60%DateWed Jul 10 14:10:41 BST 2013
Rank195Aligned Residues59
% Identity37%Templatec1s1nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180...
Predicted Secondary structure 



































Query SS confidence 


























































Query Sequence  LEYVRTLYDFPGNDAEDLPFKKGELLVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVR
Query Conservation     
 




 
   




  



 

   
  

      
  
  
 



    
Alig confidence 


























































Template Conservation 
    

 

      


   

 
 

      

         
  
  

    
Template Sequence  GEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYSE
Template Known Secondary structure 

S
B

SSSS


B
SS
S

SSS
SSS
STT


Template Predicted Secondary structure 



























Template SS confidence 


























































   154.....160.........170.........180.........190.........200.........210..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D