Job Description P47941 Confidence 99.80% Date Wed Jul 10 14:10:41 BST 2013 Rank 104 Aligned Residues 114 % Identity 16% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	S	S	P	H	G	K	H	G	N	R	N	S	N	S	Y	G	I	P	E	P	A	H	A	Y	A	Q	P	Q	T	T	T	P	L	P	T	V	A	S	T	P	G	A	A	I	N	P	L	P	S	T	Q	N	G	P	V	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K
Template Known Secondary structure				S	S																																															S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.											.	.	280	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	Q	K	R	V	P	C	A	Y	D	K	T	A	L	A	L	E	V	G	D	I	V	K	V	T	.	.	.	.	.	R	M	N	I	N	G	Q	W	E	G	.	.	.	.	.	.	.	.	.	.	E	V	N	G	R	K	G	L	F
Query Conservation																												.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F
Template Known Secondary structure					S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		287	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	T	H	V	K	I	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	N	F	T	E	R	V	P
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D