Return to main results Retrieve Phyre Job Id

Job DescriptionP47941
Confidence98.04%DateWed Jul 10 14:10:41 BST 2013
Rank316Aligned Residues118
% Identity16%Templatec1bg1A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40... ......50.........60.........
Predicted Secondary structure 


















.









Query SS confidence 
































.

























Query Sequence  RSAWYMGPVTRQEAQTRLQGQRHGMFLVRDSST. CPGDYVLSVSENSRVSHYIINSLPNR
Query Conservation     
      
  
   
     
 



 
  .      


       
  
      
Alig confidence 
































.
























.
Template Conservation        

         
     
 
  


     
                     
.
Template Sequence  NEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP.
Template Known Secondary structure  SS


B


TTGGGTTTTTS
TT
B

SS
SS





SSS
SS







.
Template Predicted Secondary structure 






























.
Template SS confidence 



























































   581........590.........600.........610.........620.........630.........
 
   70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 









































Query SS confidence 



























































Query Sequence  RFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPVGSVSAPNLPTAEENLEYVR
Query Conservation          
 

  

  
    
    
                             
 
Alig confidence  .


























































Template Conservation  .                                       
                   
Template Sequence  . YTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEAFGKYCRAAPLKTKFIC
Template Known Secondary structure  .B
GGGGTSS
TTS


B
TTSSB



SSBTTTB
TTTTTGGG











Template Predicted Secondary structure  .






























Template SS confidence 



























































   640.........650.........660.........670.........680.........690........
 
   130
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   713
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D