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Job DescriptionP47941
Confidence99.52%DateWed Jul 10 14:10:41 BST 2013
Rank275Aligned Residues69
% Identity22%Templatec1bb9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:amphiphysin 2; PDBTitle: crystal structure of the sh3 domain from rat amphiphysin 2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150... ......160......
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Query Sequence  SAPNLPTAEENLEYVRTLYDFPGNDAEDLPFKKGELLVII. . . . . EKPEEQWWSARNK. .
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Template Sequence  TTGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESD
Template Known Secondary structure 



SS

TT

SS
B

SSTTB

B
TT


S
GGG

TT
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   12.......20.........30.........40.........50.........60.........70.
 
   167..170.........180..
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Query Sequence  . . . . . . . DGRVGMIPVPYVEKLV
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Template Sequence  WNQHKELEKCRGVFPENFTERVQ
Template Known Secondary structure  TT


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   72.......80.........90....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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