|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
| Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|  |  |  |
| Query SS confidence |   |
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| Query Sequence |   |
F | N | T | I | L | E | E | I | L | I | K | R | S | Q | Q | K | K | K | T | S | L | L | N | Y | K | E | R | L | C | V | L | P | K | S | V | L | S | Y | Y | E | G | R | A | E | K | K | Y | R | K | G | V | I | D | I | S | K | I | K | C | V |
| Query Conservation |   |
  |   |   |   |   |
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|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
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|   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
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|   |
|   |
|   |   |
|   |   |
|
| Alig confidence |   |
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| . | . | . | . | . |
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| . |
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| Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |
| . | . | . | . | . |   |
|
|   |
|   |   |
|
|   |   |   |   |
|   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
S | G | P | I | K | M | G | W | L | K | K | Q | R | S | I | V | K | . |
. |
. |
. |
. |
N | W | Q | Q | R | Y | F | V | L | R | A | Q | Q | L | Y | Y | Y | . |
K | D | E | E | D | T | K | P | Q | G | C | M | Y | L | P | G | C | T | I | K |
| Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |
| S | S | S | S | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | . | S | S | S | S |
|
| S |
| S |  |  |  |
| S | T | T |  |  |  |  |
| Template Predicted Secondary structure |   |
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|
|  |  |  |  |  |  |  |  |
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| . | . | . | . | . |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  | . |  |
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|  |  |  |  |
| Template SS confidence |   |
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|   |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
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. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
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. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
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|  |  |  |  | . | . | . | . | . | . | . | . |  |
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|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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| Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
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| Query Sequence |   |
E | I | V | K | N | D | D | G | V | I | P | C | Q | N | K | F | P | F | Q | V | . |
. |
. |
. |
. |
. |
. |
. |
V | H | D | A | N | T | L | Y | I | F | A | P | S | P | Q | S | R | D | R | W | V | K | K | L | K | E | E | I | K | N | N | N |
| Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
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|
| . | . | . | . |
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|
| . | . | . | . | . | . | . | . |
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|
| Template Conservation |   |
  |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
| Template Sequence |   |
E | I | A | T | N | P | . |
. |
. |
. |
E | E | A | G | K | F | V | F | E | I | I | P | A | S | W | D | Q | N | R | M | G | Q | D | S | Y | V | L | M | A | S | S | Q | A | E | M | E | E | W | V | K | F | L | R | R | V | A | G | S | G | P |
| Template Known Secondary structure |   |
 |  |
|
|
| S | . | . | . | . | S |
|
|
|
|
|  |  |  |  |  |  | S |
|
| S | S |
|
| S | S |
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| Template Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . |
|
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|
|
|  |  |  |  |  |  |
|
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|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
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|   |   |
60 | . | . | . | . | . | |
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
|   |
|   |   |
115 |
| Predicted Secondary structure |   |
|
| Query SS confidence |   |
|
| Query Sequence |   |
N |
| Query Conservation |   |
  |
| Alig confidence |   |
|
| Template Conservation |   |
  |
| Template Sequence |   |
S |
| Template Known Secondary structure |   |
|
| Template Predicted Secondary structure |   |
|
| Template SS confidence |   |
|
|   |   |
116 |
|   |