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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank245Aligned Residues239
% Identity23%Templatec4l45A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rps6kb1 protein; PDBTitle: crystal structures of human p70s6k1-t389e
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380........ .390.........400 .........410...
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Query Sequence  EINPSELTFMRELGSGLFGVVRLGKW. . . . RAQYKVAIKAIR. . . . . EGAMCEEDFIEEA
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Template Sequence  KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER
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   62.......70.........80.........90.........100.........110.........120.
 
   414.....420.........430.........440.........450.........460.........470...
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Query Sequence  KVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVC
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Template Sequence  NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG. IFMEDTACFYLAEIS
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   122.......130.........140.........150.........160..... ....170.........180
 
   474.....480.........490.........500.........510.........520.........530...
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Query Sequence  EGMEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPP
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Template Sequence  MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG. . . . . . . . . . . . LCKESGTIEYMAP
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   181........190.........200.........210..... ....220........
 
   534.....540.........550.........560.........570.........580.........590...
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Query Sequence  EVFNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYL
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Template Sequence  EILMRSGHNRAVDWWSLGALMYDMLT. GAPPFTGENRKKTIDKILKC. KLNLPPYLTQEA
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   240.........250.........260..... ....270.........280..... ....290.......
 
   594.....600........ .610......
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Query Sequence  YEVMLRCWQERPEGR. . . . . PSLEDLLR
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Template Sequence  RDLLKKLLKRNAASRLGAGPGDAGEVQA
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   298.300.........310.........320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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