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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank127Aligned Residues246
% Identity41%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390.. .......400...... ...410.....
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Query Sequence  INPSELTFMRELGSGLFGVVRLGKWRAQY. . . . KVAIKAIREGAMCE. . . . EDFIEEAKV
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
Template Known Secondary structure 

GGG



B

TTS
TTS


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S
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   121........130.........140.........150.........160.........170.........180
 
   416...420.........430.........440.........450.........460.........470.....
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Query Sequence  MMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEG
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Template Sequence  MHSLDHRNLIRLYGVVLT. PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG
Template Known Secondary structure  T


TTB


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   181........190........ .200.........210.........220.........230.........
 
   476...480.........490.........500.........510.........520.........530.....
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Query Sequence  MEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEV
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Template Sequence  MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCAPES
Template Known Secondary structure  TT


S

SGGGSSSS


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   240.........250.........260.........270.... .....280........
 
   536...540.........550.........560.........570......... 580.........590....
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Query Sequence  FNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTR. GHRLHRPKLATKYLY
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Template Sequence  LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
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TTT

TTTT

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   302.......310.........320.........330.........340.........350.........360.
 
   595....600.........610.........620.
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Query Sequence  EVMLRCWQERPEGRPSLEDLLRTIDEL
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Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEA
Template Known Secondary structure  T
SSGGGS

T
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   362.......370.........380........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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